About the parameters in corr.test when I use in RNAseq data

I have some questions about the corr.test() function when I use in bulk RNAseq data.

Now my code is:

tm <- corr.test(data_cor,                  y = data_cor, use = "pairwise", "spearman", adjust="none",                   alpha=0.05, ci=F, minlength=5)  tm$r  tm$p  

What confused me is if I should use these parameters above just like "spearman","pairwise" or like this:method="pearson" is the default value. The alternatives to be passed to cor are "spearman" and "kendall"

Can you give me some adivce ?

https://stackoverflow.com/questions/66810083/about-the-parameters-in-corr-test-when-i-use-in-rnaseq-data March 26, 2021 at 10:04AM